DALIA Portal
Thinking data management on different scales
Thinking data management on different scales
Authors
More InfoGo to Resource
0
0
0
Description

Presentation given at PoL BioImage Analysis Symposium Dresden 2023
Details

URL: https://zenodo.org/records/8329306Communities:
    No communities

NFDI4BIOIMAGE - National Research Data Infrastructure for Microscopy and BioImage Analysis [conference talk: The Pelagic Imaging Consortium meets Helmholtz Imaging, 5.10.2023, Hamburg]
0
0
0
NFDI4BIOIMAGE - National Research Data Infrastructure for Microscopy and BioImage Analysis [conference talk: The Pelagic Imaging Consortium meets Helmholtz Imaging, 5.10.2023, Hamburg]NFDI4BIOIMAGE is a consortium within the framework of the National Research Data Infrastructure (NFDI) in Germany. In this talk, the consortium and the contribution to the work programme by the Helmholtz Centre for Environmental Research (UFZ) in Leipzig are outlined.
File Format
PDF
Languages
English
Media Type
Presentation
Publication Date
2023-10-06
License
CCBY
Size
2 MB
Authors
Keywords
#Research Data Management#Microscopy#High content screening#OMERO
Go to Resource
See Details
FAIRmat, Guide to Writing a Research Data Management Plan
0
0
0
FAIRmat, Guide to Writing a Research Data Management PlanIn this guide, we will provide you with comprehensive information and practical tips specific to the fields of condensed-matter physics and materials science on creating a data management plan (DMP) that meets the DFG requirements and aligns your research with the FAIR data principles, the DFG code of conduct, and the EU open science policy. We will take you through the essential components of a DMP, provide tips on data management best practices, and offer guidance on appropriate tools and technologies. By the end of this guide, you will have the knowledge and tools necessary to create a thorough and effective DMP that not only meets the requirements of the DFG but also supports the long-term success of your research project. This guide follows the sections in the DFG checklist, and the questions to be addressed as required by the DFG are listed after each section. Although this guide is based on the requirements of the DFG, the information is not exclusive to any specific funding agency and can be used as a general guide for other research areas. Before preparing a DMP for your project, make sure to check the specific requirements for your funding agency, discipline, and research institution.
File Format
PDF
Languages
English
Media Type
Text
Publication Date
2023-03-25
License
CCBY
Size
3 MB
Authors
Keywords
#Research Data Management#FAIR#Metadata#NFDI#Repository#Data Management Plan#Forschungsdatenmanagement#FDM#File Format#FAIR data principles
Go to Resource
See Details
A journey to FAIR microscopy data
0
0
0
A journey to FAIR microscopy dataResearch data management is essential in nowadays research, and one of the big opportunities to accelerate collaborative and innovative scientific projects. To achieve this goal, all our data needs to be FAIR (findable, accessible, interoperable, reproducible). For data acquired on microscopes, however, a common ground for FAIR data sharing is still to be established. Plenty of work on file formats, data bases, and training needs to be performed to highlight the value of data sharing and exploit its potential for bioimaging data. In this presentation, Stefanie Weidtkamp-Peters will introduce the challenges for bioimaging data management, and the necessary steps to achieve data FAIRification. German BioImaging - GMB e.V., together with other institutions, contributes to this endeavor. Janina Hanne will present how the network of imaging core facilities, research groups and industry partners is key to the German bioimaging community’s aligned collaboration toward FAIR bioimaging data. These activities have paved the way for two data management initiatives in Germany: I3D:bio (Information Infrastructure for BioImage Data) and NFDI4BIOIMAGE, a consortium of the National Research Data Infrastructure. Christian Schmidt will introduce the goals and measures of these initiatives to the benefit of imaging scientist’s work and everyday practice.
File Format
PPTX, PDF
Languages
English
Media Type
Presentation
Publication Date
2023-05-03
License
CCBY
Authors
Keywords
#Research Data Management#Microscopy#NFDI4BIOIMAGE#Bioimaging#I3Dbio
Go to Resource
See Details
Combining the BIDS and ARC Directory Structures for Multimodal Research Data Organization
0
0
0
Combining the BIDS and ARC Directory Structures for Multimodal Research Data OrganizationInterdisciplinary collaboration and integration of large and diverse datasets are becoming increasingly important. Answering complex research questions requires combining and analysing multimodal datasets. Research data management follows the FAIR principles making data findable, accessible, interoperable, and reusable. However, there are challenges in capturing the entire research cycle and contextualizing data according, not only for the DataPLANT and NFDI4BIOIMAGE communities. To address these challenges, DataPLANT developed a data structure called Annotated Research Context (ARC). The Brain Imaging Data Structure (BIDS) originated from the neuroimaging community extended for microscopic image data. Both concepts provide standardised and file system based data storage structures for organising and sharing research data accompanied with metadata. We exemplarily compare the ARC and BIDS designs and propose structural and metadata mapping.
Learning Resource Type
Poster
File Format
PDF
Languages
English
Media Type
Image
Publication Date
2023-09-12
License
CCBY
Size
2.9 MB
Authors
Keywords
#Microscopy#FAIR#Metadata#NFDI#NFDI4BIOIMAGE#Data Management#Reproducibility#Data Publishing#DataPLANT#ARC#Annotated Research Context#BIDS#Bio Imaging#Brain Imaging Data Structure#Data Packaging#Linked Data#Metadata Mapping#Multimodal Data#NFDI4Plants#Plant Science#Research Object
Go to Resource
See Details

Data
Literacy
Alliance
Sign up to our newsletterThe DALIA newsletter informs you about upcoming events and milestones.
Subscribe to NewsletterView Newsletter
Follow
Search PortalBasic SearchAdvanced Search
AccountLogin
Project WebsiteHomeQuality Control and ContinuationCommunicationInformation ModelInfrastructureSearch and Recommendation EnginePartners and Funders
CommunitiesView All Communities
LegalImprintPrivacy PolicyDeclaration on AccessibilityTerms of Use
FundersFunded by EUBMFTR Logo